The web based ReMus system for academic use is available NOW. (Web Version ReMus system)

The PC version ReMus system for academic use can be download here. ReMus system for Windows(size 2.6 M)

The details of the Reinforced Merging Algorithms can be referred to the paper by Pai, et al. ( ReMus_ref.pdf )

This step-by-step ReMus guide covers the basic strategy for searching unique peptide motifs by ReMus system. It describes the format and significance of the searched output and discusses the use of ReMus tools to extract and distinguish different levels of uniqueness of unique peptide motifs (ReMus Example).

Setting up a ReMus search

• Step 1. Plan the search
• Step 2. Enter the family sequences (or import sequence files)
• Step 3. Choose automatic or semi-automatic for ReMus programs
• Step 4. Specify the appropriate search parameters
• Step 5. Execute the program
• Step 6. Observe the protein 3D structures (Optional)

Descriptions of the ReMus output

Automatic ReMus

Semi-Automatic ReMus

• CASE 1. Merge Operations
• CASE 2. Trim Merge Operations
• CASE 3. Strict Merge Operations
• CASE 4. Strict Trim Merge Operations

The priority for ranking the unique peptide motifs